STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA24480.1PFAM: SCO1/SenC. (202 aa)    
Predicted Functional Partners:
AGA27906.1
PFAM: Cytochrome c; Cytochrome C oxidase subunit II, periplasmic domain; TIGRFAM: cytochrome c oxidase, subunit II.
 
 0.763
AGA29417.1
Protein SCO1; PFAM: Copper binding periplasmic protein CusF; SCO1/SenC.
  
     0.732
AGA24481.1
PFAM: Multicopper oxidase.
 
   
 0.719
AGA30945.1
Heme/copper-type cytochrome/quinol oxidases, subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.688
AGA24479.1
PFAM: Di-haem cytochrome c peroxidase.
 
     0.630
AGA30947.1
PFAM: Cytochrome oxidase assembly protein.
 
 
 0.559
AGA30822.1
Thiol-disulfide isomerase-like thioredoxin; PFAM: Cytochrome c; AhpC/TSA family.
 
 
 0.470
AGA30104.1
Thiol-disulfide isomerase-like thioredoxin; PFAM: AhpC/TSA family.
  
   0.417
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.