STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA24497.1Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding; PFAM: Protein of unknown function (DUF1470); CGNR zinc finger. (216 aa)    
Predicted Functional Partners:
AGA24498.1
Putative hydrolase or acyltransferase of alpha/beta superfamily.
 
     0.818
AGA24496.1
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain.
       0.565
AGA24499.1
Putative quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative quinone oxidoreductase, YhdH/YhfP family.
 
     0.473
AGA28326.1
UTP:GlnB (protein PII) uridylyltransferase; PFAM: HD domain.
  
     0.467
AGA25010.1
Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily.
  
     0.451
AGA28976.1
PFAM: Bacterial protein of unknown function (DUF899).
  
     0.425
AGA28917.1
Uncharacterized protein, 4-oxalocrotonate tautomerase; PFAM: Tautomerase enzyme.
  
     0.417
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.