STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA24559.1Hypothetical protein. (810 aa)    
Predicted Functional Partners:
AGA30889.1
PFAM: Neutral/alkaline non-lysosomal ceramidase.
  
     0.759
AGA27116.1
Dienelactone hydrolase-like enzyme.
  
     0.745
AGA25757.1
PFAM: PhoPQ-activated pathogenicity-related protein.
 
     0.736
AGA28816.1
Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel.
  
     0.722
AGA29116.1
PFAM: FG-GAP repeat.
  
     0.707
AGA31211.1
Neutral/alkaline non-lysosomal ceramidase.
  
     0.683
AGA27036.1
PFAM: Neutral/alkaline non-lysosomal ceramidase.
  
     0.680
AGA27247.1
Hypothetical protein.
  
     0.666
AGA31277.1
Hypothetical protein.
  
     0.666
AGA27881.1
Hypothetical protein.
  
     0.662
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.