STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA24629.1HEAT repeat-containing protein. (789 aa)    
Predicted Functional Partners:
AGA27436.1
Hypothetical protein.
  
     0.773
AGA31552.1
PFAM: Biopolymer transport protein ExbD/TolR.
  
     0.773
AGA29351.1
PFAM: PBS lyase HEAT-like repeat.
  
     0.772
AGA30635.1
Hypothetical protein.
  
     0.772
AGA27493.1
Hypothetical protein.
  
     0.771
AGA29013.1
Hypothetical protein.
  
 
   0.771
AGA31553.1
PFAM: Biopolymer transport protein ExbD/TolR.
  
     0.771
AGA28211.1
PFAM: PQQ enzyme repeat.
  
     0.769
AGA29273.1
Hypothetical protein.
  
     0.769
AGA25346.1
Hypothetical protein.
  
     0.768
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.