STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA24714.1Metal-dependent hydrolase, beta-lactamase superfamily III. (253 aa)    
Predicted Functional Partners:
AGA31045.1
Putative ATPase.
  
    0.640
AGA29214.1
Growth inhibitor; Toxic component of a type II toxin-antitoxin (TA) system.
 
   
 0.606
AGA30385.1
PFAM: Bacterial regulatory proteins, tetR family.
  
     0.554
AGA24715.1
PFAM: Uncharacterized conserved protein (DUF2088).
       0.539
AGA26165.1
PFAM: Protein of unknown function (DUF1444).
  
    0.503
AGA24713.1
PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase.
       0.501
AGA28580.1
PFAM: Protein of unknown function (DUF1444).
  
    0.465
AGA30413.1
Hypothetical protein.
  
    0.462
AGA28349.1
Ketosteroid isomerase-like protein.
  
     0.417
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.