STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA24823.1PFAM: Kelch motif. (336 aa)    
Predicted Functional Partners:
AGA30527.1
PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein.
  
 
 0.776
AGA26758.1
PFAM: Neutral/alkaline non-lysosomal ceramidase.
  
     0.752
AGA28014.1
Hypothetical protein; PFAM: Neutral/alkaline non-lysosomal ceramidase.
  
     0.738
AGA28313.1
Prolyl oligopeptidase family protein.
  
     0.721
AGA24504.1
PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
  
 
   0.709
AGA26651.1
PFAM: Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase.
  
     0.705
AGA30980.1
Putative TIM-barrel fold metal-dependent hydrolase; PFAM: Amidohydrolase.
  
     0.694
AGA24642.1
PFAM: Neutral/alkaline non-lysosomal ceramidase.
  
     0.693
AGA27721.1
Putative translation initiation inhibitor, yjgF family; PFAM: Endoribonuclease L-PSP.
  
     0.685
AGA25909.1
Hypothetical protein.
 
     0.679
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.