STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA24842.1N-terminal double-transmembrane domain-containing protein; PFAM: von Willebrand factor type A domain; Aerotolerance regulator N-terminal; TIGRFAM: N-terminal double-transmembrane domain. (704 aa)    
Predicted Functional Partners:
AGA24841.1
Hypothetical protein.
 
     0.940
AGA24843.1
PFAM: Protein of unknown function DUF58.
 
    0.927
AGA24845.1
Hypothetical protein.
 
     0.908
AGA24840.1
Uncharacterized membrane protein; PFAM: Protein of unknown function (DUF1355).
 
     0.884
AGA24839.1
Hypothetical protein.
 
     0.870
AGA24846.1
Hypothetical protein.
 
     0.839
AGA24844.1
PFAM: ATPase family associated with various cellular activities (AAA).
 
    0.820
AGA30699.1
PFAM: Bacterial pre-peptidase C-terminal domain.
  
     0.721
AGA27741.1
PFAM: Aerotolerance regulator N-terminal; TIGRFAM: N-terminal double-transmembrane domain.
  
     0.682
AGA27740.1
Hypothetical protein.
 
     0.677
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.