STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA24875.1PFAM: Protein of unknown function (DUF1264). (228 aa)    
Predicted Functional Partners:
AGA24876.1
Rhodanese-related sulfurtransferase; PFAM: Protein of unknown function (DUF2892); Rhodanese-like domain.
       0.543
AGA24873.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
       0.505
AGA24874.1
PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
       0.505
AGA27994.1
Protocatechuate 3,4-dioxygenase beta subunit; PFAM: Dioxygenase; Catechol dioxygenase N terminus.
  
     0.459
AGA24877.1
Putative membrane protein; PFAM: Rhomboid family.
 
     0.458
AGA30218.1
acyl-CoA cholesterol acyltransferase; PFAM: MBOAT family.
  
     0.411
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.