STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA24978.1PFAM: Protein kinase domain; FHA domain. (482 aa)    
Predicted Functional Partners:
AGA25791.1
PFAM: Protein phosphatase 2C.
 
 
 0.853
AGA27782.1
PFAM: Protein phosphatase 2C.
 
 
 0.852
AGA25428.1
Serine/threonine protein phosphatase; PFAM: Stage II sporulation protein E (SpoIIE).
 
 
 0.850
AGA26694.1
PFAM: Protein kinase domain; Tetratricopeptide repeat.
 
 
 0.837
AGA28832.1
PFAM: Protein kinase domain.
  
 
   0.812
AGA25273.1
PFAM: Protein kinase domain.
 
  
0.572
AGA27056.1
PFAM: Protein kinase domain.
 
  
0.570
AGA30724.1
PFAM: Protein kinase domain; Tetratricopeptide repeat.
 
 
0.568
AGA30611.1
PFAM: Dehydrogenase E1 component; Transketolase, pyrimidine binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component.
    
 
 0.566
AGA29573.1
PFAM: Protein kinase domain; FHA domain.
 
 
  
0.563
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.