STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA24987.1PFAM: Protein of Unknown function (DUF2784). (146 aa)    
Predicted Functional Partners:
AGA24986.1
PFAM: 56kDa selenium binding protein (SBP56).
       0.598
AGA24985.1
PFAM: SCO1/SenC.
       0.517
AGA24984.1
Conserved protein of unknown function BmrU; PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: lipid kinase, YegS/Rv2252/BmrU family.
       0.489
AGA30982.1
Flp pilus assembly protein TadG; PFAM: Predicted membrane protein (DUF2134).
  
     0.488
AGA25669.1
PFAM: Sigma 54 modulation protein / S30EA ribosomal protein.
  
     0.455
AGA24677.1
Cupin domain-containing protein; PFAM: Cupin domain.
  
     0.442
AGA27628.1
Hypothetical protein.
  
     0.438
AGA28211.1
PFAM: PQQ enzyme repeat.
  
     0.438
AGA30101.1
PFAM: Protein of unknown function (DUF1501).
  
     0.420
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.