STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA24988.1UDP-N-acetylmuramyl tripeptide synthase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: cyanophycin synthetase. (649 aa)    
Predicted Functional Partners:
AGA25244.1
Cyanophycinase; PFAM: Peptidase family S51; TIGRFAM: cyanophycinase; Belongs to the peptidase S51 family.
 
   
 0.797
AGA29129.1
PFAM: Domain of unknown function (DUF1854).
 
     0.749
AGA29130.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter.
  
     0.702
AGA25457.1
Cysnophycinase-like exopeptidase; PFAM: Peptidase family S51; Belongs to the peptidase S51 family.
 
   
 0.612
AGA24658.1
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; PFAM: Glycosyl transferases group 1; Monogalactosyldiacylglycerol (MGDG) synthase.
  
 
 0.545
AGA30252.1
PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain.
 
  
 0.515
AGA30250.1
Cell division septal protein; PFAM: POTRA domain, FtsQ-type.
  
  
 0.454
AGA24989.1
Hypothetical protein.
       0.444
AGA26784.1
Putative xylanase/chitin deacetylase; PFAM: Polysaccharide deacetylase.
 
   
 0.444
AGA25693.1
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; PFAM: Glycosyl transferase family 4.
  
  
 0.434
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.