STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA25000.1Putative pyrophosphatase; PFAM: MazG nucleotide pyrophosphohydrolase domain. (108 aa)    
Predicted Functional Partners:
AGA27307.1
Hypothetical protein.
  
     0.723
AGA29091.1
PEGA domain-containing protein; PFAM: PEGA domain.
  
     0.719
AGA27848.1
Hypothetical protein.
  
     0.710
AGA26273.1
PFAM: Protein of unknown function DUF2617.
  
     0.674
AGA30179.1
Hypothetical protein.
  
     0.653
AGA29391.1
PFAM: CYTH domain; TIGRFAM: adenylyl cyclase CyaB, putative.
  
     0.648
AGA29007.1
Hypothetical protein.
  
     0.644
AGA25001.1
Hypothetical protein.
 
     0.639
secE
Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family.
  
     0.615
rpoZ
RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
    0.576
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.