STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA25105.1PFAM: Protein of unknown function (DUF2721). (177 aa)    
Predicted Functional Partners:
AGA31467.1
PFAM: Bacterial lipid A biosynthesis acyltransferase.
  
     0.669
AGA27486.1
PFAM: Bacterial protein of unknown function (DUF885).
  
     0.624
AGA27582.1
Hypothetical protein.
  
    0.564
AGA25704.1
acyl-CoA hydrolase.
  
     0.561
AGA27285.1
PFAM: Protein of unknown function (DUF2029).
  
     0.532
AGA30637.1
Hypothetical protein; PFAM: Rad52/22 family double-strand break repair protein.
  
     0.514
AGA27205.1
Mn2+-dependent serine/threonine protein kinase; PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family.
  
     0.501
AGA29089.1
Hypothetical protein.
  
     0.498
AGA25708.1
ABC-type transport system involved in resistance to organic solvents, periplasmic component; PFAM: mce related protein; OmpA family.
  
     0.495
AGA27459.1
Hypothetical protein.
  
     0.495
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.