STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA25114.1PFAM: Transmembrane proteins 14C. (117 aa)    
Predicted Functional Partners:
AGA25115.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
       0.541
AGA28777.1
Hypothetical protein; PFAM: Domain of unknown function (DUF2382); TIGRFAM: conserved domain.
  
     0.538
AGA25468.1
Hypothetical protein.
  
     0.537
AGA29960.1
Hypothetical protein.
  
     0.510
AGA29507.1
Hypothetical protein.
  
     0.488
AGA31592.1
PFAM: Protein of unknown function (DUF820).
  
     0.454
AGA25160.1
PFAM: Glucose-6-phosphate dehydrogenase subunit.
  
     0.435
AGA24574.1
PFAM: Protein of unknown function (DUF820).
  
     0.433
AGA25113.1
PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
       0.433
AGA28626.1
Hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase.
  
     0.422
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.