STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA25163.1Hypothetical protein. (206 aa)    
Predicted Functional Partners:
AGA25164.1
PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Hpt domain.
  
   0.800
AGA31480.1
Peroxiredoxin; PFAM: AhpC/TSA family.
  
 0.778
AGA25165.1
PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
       0.773
AGA28537.1
PFAM: Carbohydrate-selective porin, OprB family; Belongs to the OprB family.
  
     0.609
AGA30697.1
Hypothetical protein.
  
     0.607
AGA27906.1
PFAM: Cytochrome c; Cytochrome C oxidase subunit II, periplasmic domain; TIGRFAM: cytochrome c oxidase, subunit II.
   
 
 0.570
AGA24869.1
Putative membrane-bound dehydrogenase; PFAM: Cytochrome c; Domain of Unknown Function (DUF1080); TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type.
 
 
   0.558
AGA31144.1
Hypothetical protein.
  
     0.553
AGA27721.1
Putative translation initiation inhibitor, yjgF family; PFAM: Endoribonuclease L-PSP.
  
     0.534
AGA27748.1
PFAM: Protein of unknown function (DUF1559).
  
     0.533
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.