STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA25185.1Putative NTP binding protein (contains STAS domain); PFAM: STAS domain. (101 aa)    
Predicted Functional Partners:
AGA25911.1
ABC-type transport system involved in resistance to organic solvents, ATPase component; PFAM: ABC transporter.
  
 
 0.528
AGA25186.1
Serine phosphatase RsbU, regulator of sigma subunit; PFAM: Response regulator receiver domain; Stage II sporulation protein E (SpoIIE).
       0.525
AGA25184.1
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; PFAM: Response regulator receiver domain.
       0.487
AGA25537.1
ABC-type transport system involved in resistance to organic solvents, periplasmic component; PFAM: mce related protein.
  
 
 0.411
AGA25708.1
ABC-type transport system involved in resistance to organic solvents, periplasmic component; PFAM: mce related protein; OmpA family.
  
 
 0.411
AGA25912.1
ABC-type transport system involved in resistance to organic solvents, periplasmic component; PFAM: mce related protein.
  
 
 0.411
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.