STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA25212.15'-nucleotidase/2',3'-cyclic phosphodiesterase-like hydrolase; PFAM: Doubled CXXCH motif (Paired_CXXCH_1). (537 aa)    
Predicted Functional Partners:
AGA25211.1
Hypothetical protein.
 
     0.782
AGA26959.1
Hypothetical protein.
 
    0.725
AGA27400.1
Hypothetical protein.
 
    0.718
AGA31124.1
Putative membrane protein, required for colicin V production; PFAM: Colicin V production protein.
  
     0.700
AGA25337.1
PFAM: Protein of unknown function (DUF1559).
 
   
 0.699
AGA31354.1
Hypothetical protein.
 
    0.699
AGA26287.1
HD domain-containing protein; PFAM: HD domain.
 
     0.695
AGA25102.1
PFAM: Protein of unknown function (DUF1559).
 
   
 0.693
AGA30944.1
PFAM: Cytochrome c.
 
   
 0.693
AGA30290.1
Hypothetical protein.
  
     0.688
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.