STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA25230.1PFAM: Acetyltransferase (GNAT) family. (176 aa)    
Predicted Functional Partners:
AGA25231.1
Putative Zn-dependent peptidase; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16).
 
 
   0.805
AGA27518.1
Hypothetical protein.
  
     0.738
AGA27650.1
Hypothetical protein.
  
     0.735
rpoZ
RNA polymerase Rpb6; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.724
AGA29017.1
Hypothetical protein.
  
     0.711
AGA29250.1
Hypothetical protein.
  
     0.708
AGA30525.1
Hypothetical protein.
  
     0.682
AGA29967.1
Hypothetical protein.
  
     0.667
AGA27734.1
PFAM: Protein of unknown function (DUF1559).
  
     0.657
AGA26903.1
Putative periplasmic or secreted lipoprotein; PFAM: Putative phospholipid-binding domain.
  
     0.651
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.