STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA25275.1Hypothetical protein; PFAM: NIPSNAP. (158 aa)    
Predicted Functional Partners:
AGA25356.1
Putative heme-binding domain-containing protein; PFAM: Cytochrome c; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type.
  
     0.606
AGA25098.1
PFAM: FG-GAP repeat.
  
     0.591
AGA30329.1
Sugar phosphate isomerase/epimerase; PFAM: AP endonuclease family 2 C terminus; Xylose isomerase-like TIM barrel; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
  
     0.582
AGA31091.1
Hypothetical protein.
  
     0.569
AGA27395.1
PFAM: Cytochrome c; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type.
  
     0.556
AGA29851.1
Lysophospholipase L1-like esterase; PFAM: GDSL-like Lipase/Acylhydrolase.
  
     0.554
AGA30560.1
Uncharacterized protein involved in outer membrane biogenesis; PFAM: AsmA family.
   
    0.554
AGA31493.1
Hypothetical protein.
   
    0.554
AGA29916.1
Glucose/sorbosone dehydrogenase.
  
     0.534
AGA27519.1
PFAM: Protein of unknown function (DUF3500).
  
     0.525
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.