STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA25376.1Hypothetical protein. (386 aa)    
Predicted Functional Partners:
AGA28781.1
Hypothetical protein.
  
     0.737
AGA25514.1
Hypothetical protein.
  
   
 0.736
AGA30464.1
Hypothetical protein.
  
     0.710
AGA25375.1
PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457).
       0.705
AGA29763.1
DNA-directed RNA polymerase, alpha subunit/40 kD subunit; PFAM: Tetratricopeptide repeat; Bacterial RNA polymerase, alpha chain C terminal domain.
  
   0.685
AGA27734.1
PFAM: Protein of unknown function (DUF1559).
  
     0.684
AGA25102.1
PFAM: Protein of unknown function (DUF1559).
  
     0.681
AGA26287.1
HD domain-containing protein; PFAM: HD domain.
 
     0.663
AGA29165.1
Hypothetical protein.
  
     0.663
AGA25922.1
Hypothetical protein.
  
     0.657
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.