STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA25379.1PFAM: Uncharacterised protein family (UPF0156); TIGRFAM: putative addiction module antidote protein, CC2985 family. (87 aa)    
Predicted Functional Partners:
AGA25380.1
PFAM: Plasmid stabilisation system protein; manually curated; non-canonical start codon.
 
 
 0.988
AGA27526.1
PFAM: Plasmid stabilisation system protein.
 
 
 0.943
AGA29214.1
Growth inhibitor; Toxic component of a type II toxin-antitoxin (TA) system.
   
 
 0.577
AGA25378.1
Putative membrane protein; PFAM: Domain of unknown function DUF.
 
     0.526
AGA27527.1
PFAM: Uncharacterised protein family (UPF0156); TIGRFAM: putative addiction module antidote protein, CC2985 family.
  
     0.493
AGA27045.1
NAD-dependent protein deacetylase, SIR2 family; PFAM: Sir2 family.
   
    0.438
cobB
NAD-dependent protein deacetylase, SIR2 family; PFAM: Sir2 family; Belongs to the sirtuin family. Class III subfamily.
   
    0.438
AGA31592.1
PFAM: Protein of unknown function (DUF820).
  
     0.414
AGA28149.1
PFAM: Bacterial regulatory proteins, gntR family; UTRA domain.
   
    0.400
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.