STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA25443.1MoxR-like ATPase; PFAM: AAA domain (dynein-related subfamily). (328 aa)    
Predicted Functional Partners:
AGA25444.1
Hypothetical protein.
 
     0.903
AGA29507.1
Hypothetical protein.
  
     0.623
AGA29136.1
Hypothetical protein.
  
     0.573
AGA28842.1
Xaa-Pro aminopeptidase; PFAM: Metallopeptidase family M24.
  
     0.505
AGA24577.1
PFAM: Protein of unknown function (DUF721).
  
     0.496
AGA25442.1
PFAM: Protein of unknown function (DUF502).
       0.481
AGA25445.1
Hypothetical protein.
       0.466
AGA26903.1
Putative periplasmic or secreted lipoprotein; PFAM: Putative phospholipid-binding domain.
  
     0.438
AGA31124.1
Putative membrane protein, required for colicin V production; PFAM: Colicin V production protein.
  
    0.427
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.