STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA25444.1Hypothetical protein. (624 aa)    
Predicted Functional Partners:
AGA25443.1
MoxR-like ATPase; PFAM: AAA domain (dynein-related subfamily).
 
     0.903
AGA29136.1
Hypothetical protein.
  
     0.725
secY
Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
   0.663
AGA31124.1
Putative membrane protein, required for colicin V production; PFAM: Colicin V production protein.
  
     0.647
AGA26903.1
Putative periplasmic or secreted lipoprotein; PFAM: Putative phospholipid-binding domain.
  
     0.642
AGA29507.1
Hypothetical protein.
  
     0.636
AGA25445.1
Hypothetical protein.
       0.627
AGA29017.1
Hypothetical protein.
  
     0.608
AGA27204.1
PFAM: Protein of unknown function (DUF1570).
  
     0.580
AGA30944.1
PFAM: Cytochrome c.
  
     0.570
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.