STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA25502.1Putative permease; PFAM: Domain of unknown function (DUF897). (517 aa)    
Predicted Functional Partners:
AGA26871.1
PFAM: Nitrogen regulatory protein P-II.
   
 
 0.694
AGA28068.1
PFAM: Nitrogen regulatory protein P-II.
   
 
 0.694
AGA28211.1
PFAM: PQQ enzyme repeat.
  
     0.548
AGA28204.1
Hypothetical protein.
  
     0.496
AGA24629.1
HEAT repeat-containing protein.
  
     0.491
AGA30408.1
PFAM: Glycosyl hydrolases family 38 N-terminal domain.
  
     0.481
AGA31552.1
PFAM: Biopolymer transport protein ExbD/TolR.
  
     0.443
AGA31553.1
PFAM: Biopolymer transport protein ExbD/TolR.
  
     0.431
AGA28203.1
Hypothetical protein.
  
     0.428
AGA25501.1
Hypothetical protein.
       0.411
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.