STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA25523.1PFAM: Amino acid permease. (483 aa)    
Predicted Functional Partners:
AGA29977.1
Trehalose synthase; PFAM: Alpha amylase, catalytic domain; Phosphotransferase enzyme family; TIGRFAM: trehalose synthase; trehalose synthase-fused probable maltokinase.
   
 0.505
glgE
Glycosidase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
   
 0.505
AGA30291.1
Glycosidase; PFAM: Alpha amylase, catalytic domain.
   
 0.505
AGA31103.1
Glycosidase; PFAM: Alpha amylase, catalytic domain.
   
 0.505
AGA29835.1
PFAM: Amino acid permease; TIGRFAM: permease, urea carboxylase system.
  
     0.502
AGA25524.1
PFAM: PBS lyase HEAT-like repeat.
       0.452
AGA25522.1
Hypothetical protein.
       0.432
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.