STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA25533.1Hypothetical protein; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase. (544 aa)    
Predicted Functional Partners:
AGA25532.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
 
     0.662
AGA27216.1
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.598
AGA29933.1
Hypothetical protein.
  
     0.577
AGA29523.1
Hypothetical protein.
  
     0.569
AGA27571.1
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase.
  
     0.539
AGA30764.1
ABC-2 type transporter.
  
     0.533
AGA27765.1
Arylsulfatase A family protein; PFAM: Sulfatase.
  
     0.529
AGA25001.1
Hypothetical protein.
  
     0.516
AGA27452.1
Arylsulfatase A family protein; PFAM: Sulfatase.
  
     0.514
AGA26624.1
Hypothetical protein.
  
     0.508
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.