STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA25795.1Putative dioxygenase; PFAM: Memo-like protein. (413 aa)    
Predicted Functional Partners:
AGA25794.1
Putative hydrolase or acyltransferase of alpha/beta superfamily.
  
    0.775
AGA26176.1
Hypothetical protein.
   
  0.629
AGA27685.1
Hypothetical protein.
   
  0.629
AGA25518.1
Hypothetical protein; PFAM: Domain of unknown function (DUF362).
  
     0.580
AGA26166.1
Cytochrome c, mono- and diheme variants family; PFAM: Cytochrome c.
  
     0.547
AGA26012.1
Hypothetical protein.
  
     0.488
AGA25793.1
Precorrin-6Y C5,15-methyltransferase (decarboxylating); PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: methyltransferase, FkbM family; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit.
       0.486
AGA29546.1
PFAM: Archease protein family (DUF101/UPF0211).
 
     0.485
AGA24891.1
PFAM: RNA 3'-terminal phosphate cyclase (RTC), insert domain; RNA 3'-terminal phosphate cyclase; TIGRFAM: RNA 3'-phosphate cyclase.
  
   
 0.460
AGA26224.1
Hypothetical protein.
  
     0.456
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.