STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA25805.1Hypothetical protein. (766 aa)    
Predicted Functional Partners:
AGA27906.1
PFAM: Cytochrome c; Cytochrome C oxidase subunit II, periplasmic domain; TIGRFAM: cytochrome c oxidase, subunit II.
  
 
 0.873
AGA27913.1
Fe-S-cluster-containing hydrogenase subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.870
AGA26197.1
PFAM: Cytochrome c.
  
 
 0.594
AGA25468.1
Hypothetical protein.
  
     0.546
AGA27148.1
Hypothetical protein.
 
    0.545
AGA30702.1
Ankyrin repeat-containing protein.
  
     0.544
AGA26309.1
Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
  
     0.519
AGA30075.1
Hypothetical protein.
  
     0.505
AGA25315.1
Uncharacterized protein, possibly involved in utilization of glycolate and propanediol; PFAM: Domain of unknown function (DUF336).
  
     0.493
AGA26194.1
Rieske Fe-S protein; PFAM: Rieske [2Fe-2S] domain.
  
   0.479
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.