STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA25854.1ABC-type multidrug transport system, permease component. (353 aa)    
Predicted Functional Partners:
AGA25853.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.913
AGA30182.1
ABC-type Na+ efflux pump, permease component; PFAM: CAAX amino terminal protease family.
  
  
 0.667
AGA26661.1
PFAM: Nitroreductase family; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase.
  
  
 0.631
AGA29035.1
PFAM: Nitroreductase family.
  
  
 0.631
AGA27073.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.610
AGA28017.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.508
AGA30465.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.471
AGA27072.1
ABC-type multidrug transport system, permease component.
  
  
  0.470
AGA30058.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.468
AGA30187.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.468
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.