STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA25909.1Hypothetical protein. (334 aa)    
Predicted Functional Partners:
AGA27039.1
Membrane protein involved in colicin uptake; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553).
  
     0.743
AGA30242.1
PFAM: Planctomycete cytochrome C; Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
  
   0.717
AGA25779.1
PFAM: Protein of unknown function (DUF1501).
  
     0.710
AGA30101.1
PFAM: Protein of unknown function (DUF1501).
  
     0.705
AGA24503.1
PFAM: Protein of unknown function (DUF1501).
  
     0.704
AGA24504.1
PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
  
     0.688
AGA24823.1
PFAM: Kelch motif.
 
     0.679
AGA31072.1
Hypothetical protein.
  
     0.671
AGA29280.1
PFAM: Cytochrome c; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type.
  
    0.669
AGA26566.1
Hypothetical protein.
 
  
 0.664
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.