STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA25921.1Type II secretory pathway, component ExeA (predicted ATPase). (264 aa)    
Predicted Functional Partners:
AGA25852.1
Type II secretory pathway, component ExeA (predicted ATPase).
  
     0.766
AGA29998.1
PFAM: Transmembrane exosortase (Exosortase_EpsH); TIGRFAM: exosortase/archaeosortase family protein; exosortase.
 
    0.599
AGA25920.1
RNA methyltransferase, RsmE family; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
       0.591
AGA29605.1
PFAM: Protein of unknown function, DUF482; TIGRFAM: FemAB-related protein, PEP-CTERM system-associated.
 
     0.581
AGA25919.1
Putative permease; PFAM: Sulfite exporter TauE/SafE.
       0.542
AGA25922.1
Hypothetical protein.
       0.512
AGA25923.1
Hypothetical protein.
       0.512
AGA29609.1
Lipid A core-O-antigen ligase-like enyme; PFAM: O-Antigen ligase; TIGRFAM: probable O-glycosylation ligase, exosortase A-associated.
 
     0.510
AGA29601.1
PFAM: Transmembrane exosortase (Exosortase_EpsH); TIGRFAM: exosortase/archaeosortase family protein; exosortase.
 
    0.505
AGA29597.1
PFAM: Domain of unknown function (DUF3473); Polysaccharide deacetylase; TIGRFAM: polysaccharide deacetylase family protein, PEP-CTERM locus subfamily.
 
     0.500
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.