STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA26099.1Putative RND superfamily drug exporter; PFAM: MMPL family. (916 aa)    
Predicted Functional Partners:
AGA29273.1
Hypothetical protein.
  
     0.546
AGA29722.1
Hypothetical protein.
  
     0.527
AGA26901.1
Hypothetical protein.
  
     0.512
AGA29349.1
Hypothetical protein.
  
     0.512
AGA29223.1
Hypothetical protein.
  
     0.509
AGA31572.1
Hypothetical protein.
  
     0.509
AGA25346.1
Hypothetical protein.
  
 
   0.504
AGA27843.1
Hypothetical protein.
  
     0.502
AGA29284.1
Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily.
  
 
   0.487
AGA31493.1
Hypothetical protein.
  
     0.482
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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