STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA26134.1Hypothetical protein. (440 aa)    
Predicted Functional Partners:
AGA26135.1
PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; Belongs to the LDH/MDH superfamily.
     
 0.822
AGA28211.1
PFAM: PQQ enzyme repeat.
  
     0.707
AGA28313.1
Prolyl oligopeptidase family protein.
  
     0.693
AGA26293.1
PFAM: FG-GAP repeat.
  
     0.678
AGA29319.1
PFAM: Phosphate-selective porin O and P.
  
     0.675
AGA28204.1
Hypothetical protein.
  
    0.656
AGA26697.1
PFAM: Phosphate-selective porin O and P.
  
     0.650
AGA31511.1
PFAM: Phosphate-selective porin O and P.
  
     0.646
AGA31058.1
Hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase.
 
  
 0.644
AGA28203.1
Hypothetical protein.
  
     0.619
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.