STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA26137.1Carbon dioxide concentrating mechanism/carboxysome shell protein; PFAM: Ethanolamine utilisation protein EutN/carboxysome. (92 aa)    
Predicted Functional Partners:
AGA26143.1
Carbon dioxide concentrating mechanism/carboxysome shell protein; PFAM: BMC domain.
   
 
 0.848
AGA26144.1
Carbon dioxide concentrating mechanism/carboxysome shell protein; PFAM: BMC domain.
   
 
 0.811
AGA26145.1
Carbon dioxide concentrating mechanism/carboxysome shell protein; PFAM: BMC domain.
   
 
 0.811
AGA26139.1
Carbon dioxide concentrating mechanism/carboxysome shell protein; PFAM: Ethanolamine utilisation protein EutN/carboxysome.
       0.808
AGA26138.1
Hypothetical protein.
       0.787
AGA26140.1
PFAM: Aldehyde dehydrogenase family.
     
 0.771
AGA26136.1
Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase; PFAM: Class II Aldolase and Adducin N-terminal domain.
       0.690
AGA26141.1
Carbon dioxide concentrating mechanism/carboxysome shell protein; PFAM: Ethanolamine utilisation protein EutN/carboxysome.
       0.604
AGA26135.1
PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; Belongs to the LDH/MDH superfamily.
       0.535
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.522
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.