STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA26151.1Hypothetical protein. (581 aa)    
Predicted Functional Partners:
AGA26152.1
Hypothetical protein.
       0.773
AGA26279.1
Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel.
  
     0.618
AGA25001.1
Hypothetical protein.
  
     0.516
AGA30408.1
PFAM: Glycosyl hydrolases family 38 N-terminal domain.
  
     0.463
AGA25818.1
PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
  
     0.459
AGA26919.1
Uncharacterized membrane protein; PFAM: von Willebrand factor type A domain; Protein of unknown function (DUF1355).
  
     0.444
AGA25002.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.436
AGA30628.1
Hypothetical protein.
  
     0.413
AGA26153.1
Hypothetical protein.
       0.409
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.