STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA26165.1PFAM: Protein of unknown function (DUF1444). (414 aa)    
Predicted Functional Partners:
AGA26164.1
Hypothetical protein.
       0.752
AGA24652.1
FHA domain-containing protein; PFAM: FHA domain.
  
     0.666
AGA31045.1
Putative ATPase.
  
     0.606
AGA26519.1
Transposase family protein; PFAM: Transposase DDE domain; Transposase domain (DUF772).
  
     0.559
AGA27605.1
Transposase family protein; PFAM: Transposase DDE domain; Transposase domain (DUF772).
  
     0.559
AGA27917.1
Transposase family protein; PFAM: Transposase DDE domain; Transposase domain (DUF772).
  
     0.559
AGA26859.1
Transposase family protein; PFAM: Transposase DDE domain; Transposase domain (DUF772).
  
     0.554
AGA26725.1
FHA domain-containing protein; PFAM: FHA domain.
  
     0.549
AGA24714.1
Metal-dependent hydrolase, beta-lactamase superfamily III.
  
    0.503
AGA31358.1
PFAM: Uncharacterized conserved protein (DUF2293).
  
     0.427
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.