STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA26219.1Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel. (270 aa)    
Predicted Functional Partners:
AGA26218.1
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein; PFAM: short chain dehydrogenase.
       0.675
AGA29829.1
Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel.
  
     0.672
AGA26131.1
Putative dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold.
  
    0.576
AGA27881.1
Hypothetical protein.
  
     0.560
AGA29828.1
Putative dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain.
  
    0.534
AGA30737.1
Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel.
  
     0.530
AGA30962.1
Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel.
  
     0.514
AGA30889.1
PFAM: Neutral/alkaline non-lysosomal ceramidase.
  
     0.507
AGA26216.1
Putative TIM-barrel enzyme, possibly a dioxygenase; PFAM: TIM-barrel signal transduction protein.
       0.492
AGA26217.1
PFAM: Uncharacterised protein family (UPF0261).
       0.492
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.