STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA26240.1Hypothetical protein; PFAM: FIST C domain; FIST N domain. (386 aa)    
Predicted Functional Partners:
AGA26239.1
Dienelactone hydrolase-like enzyme; PFAM: Dienelactone hydrolase family.
       0.709
AGA29673.1
Putative integral membrane protein; PFAM: Uncharacterised protein family (UPF0104).
  
     0.572
AGA26277.1
Phosphatidylglycerophosphate synthase; PFAM: CDP-alcohol phosphatidyltransferase.
  
     0.501
AGA29621.1
FHA domain-containing protein; PFAM: FHA domain.
  
     0.450
AGA27668.1
Hypothetical protein.
  
     0.438
AGA25684.1
TIGRFAM: conserved hypothetical protein.
  
     0.434
AGA25195.1
TIGRFAM: conserved hypothetical protein.
  
     0.414
AGA27109.1
TIGRFAM: conserved hypothetical protein.
  
     0.410
AGA30656.1
Hypothetical protein; PFAM: S-adenosyl-l-methionine hydroxide adenosyltransferase.
  
     0.410
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.