STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA26274.1Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain. (237 aa)    
Predicted Functional Partners:
AGA26276.1
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
     0.754
AGA26275.1
Hypothetical protein.
       0.737
AGA26277.1
Phosphatidylglycerophosphate synthase; PFAM: CDP-alcohol phosphatidyltransferase.
 
     0.733
AGA25824.1
Hypothetical protein.
  
     0.626
AGA27652.1
Hypothetical protein.
  
     0.610
AGA29223.1
Hypothetical protein.
  
     0.581
AGA27843.1
Hypothetical protein.
  
     0.575
AGA31304.1
Hypothetical protein.
  
     0.571
AGA31574.1
Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: MatE.
  
     0.556
AGA30560.1
Uncharacterized protein involved in outer membrane biogenesis; PFAM: AsmA family.
  
     0.550
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.