STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA26319.1Nuclease-like protein,protein kinase family protein; PFAM: Protein kinase domain; Nuclease-related domain; Bacterial RNA polymerase, alpha chain C terminal domain. (1413 aa)    
Predicted Functional Partners:
AGA26318.1
PFAM: Eco57I restriction endonuclease.
 
     0.946
AGA26315.1
Hypothetical protein.
 
     0.775
AGA26313.1
PFAM: Protein of unknown function (DUF2791).
  
     0.774
AGA26314.1
PglZ domain-containing protein; PFAM: PglZ domain.
  
     0.774
AGA26312.1
PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase.
  
     0.770
AGA27748.1
PFAM: Protein of unknown function (DUF1559).
  
     0.452
AGA28832.1
PFAM: Protein kinase domain.
  
     0.443
AGA25791.1
PFAM: Protein phosphatase 2C.
  
   0.432
AGA28449.1
Putative transcription factor, MBF1 like protein; PFAM: Helix-turn-helix.
  
     0.430
AGA27782.1
PFAM: Protein phosphatase 2C.
  
   0.417
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.