STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA26350.1PFAM: Uncharacterized conserved protein (DUF2294). (153 aa)    
Predicted Functional Partners:
AGA26344.1
PFAM: Uncharacterized conserved protein (DUF2294).
 
     0.800
AGA26351.1
Membrane protease subunit, stomatin/prohibitin; PFAM: SPFH domain / Band 7 family.
       0.773
AGA25615.1
PFAM: Glycosyl transferase family 2; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies).
  
     0.713
AGA29208.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2309); Belongs to the UPF0753 family.
  
  
 0.524
AGA27172.1
PFAM: Carbonic anhydrase.
 
    0.504
AGA26349.1
PFAM: Protein of unknown function (DUF1328).
       0.497
AGA30516.1
Phosphodiesterase/alkaline phosphatase D; PFAM: Calcineurin-like phosphoesterase.
  
     0.481
AGA25716.1
Hypothetical protein.
  
     0.473
AGA27108.1
Hypothetical protein.
  
     0.454
AGA26279.1
Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase-like TIM barrel.
  
     0.446
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.