STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA26409.1ABC-type Fe3+ transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein. (356 aa)    
Predicted Functional Partners:
AGA26408.1
ABC-type Fe3+ transport system, permease component.
 
 
 0.996
AGA26407.1
ABC-type spermidine/putrescine transport system, ATPase component; PFAM: ABC transporter.
 
 
 0.980
AGA26280.1
ABC-type Fe3+ transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.978
AGA30866.1
ABC-type Fe3+ transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.953
AGA29085.1
ABC-type Fe3+ transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein.
  
  
 
0.915
AGA25151.1
High-affinity Fe2+/Pb2+ permease; PFAM: Iron permease FTR1 family; TIGRFAM: FTR1 family protein.
   
  
 0.670
AGA25152.1
PFAM: Fe2+ transport protein.
   
  
 0.652
AGA30864.1
ABC-type spermidine/putrescine transport system, ATPase component; PFAM: ABC transporter; TOBE domain.
 
  
 0.588
AGA27468.1
Flagellar motor protein; PFAM: OmpA family.
    
   0.495
AGA26566.1
Hypothetical protein.
  
  
 0.494
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.