STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA26419.1ABC-type antimicrobial peptide transport system, permease component; PFAM: Predicted permease. (374 aa)    
Predicted Functional Partners:
AGA26421.1
Multidrug resistance efflux pump; PFAM: HlyD family secretion protein.
 
    0.914
AGA26420.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
   0.875
AGA27312.1
Multidrug resistance efflux pump; PFAM: HlyD family secretion protein.
 
    0.758
AGA31163.1
TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.691
AGA29073.1
TIGRFAM: ABC exporter membrane fusion protein, DevB family.
 
    0.688
AGA27313.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
   0.603
AGA29076.1
ABC-type phosphate/phosphonate transport system, ATPase component; PFAM: ABC transporter; Cyclic nucleotide-binding domain.
 
 
 0.555
AGA26867.1
PFAM: Outer membrane efflux protein.
  
   0.430
AGA30127.1
PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.429
AGA31507.1
PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.428
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.