STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA26425.1Periplasmic component of the Tol biopolymer transport system; PFAM: WD40-like Beta Propeller Repeat. (429 aa)    
Predicted Functional Partners:
AGA26427.1
Hypothetical protein.
 
     0.792
AGA25140.1
PFAM: Cytochrome c; Di-haem cytochrome c peroxidase; TIGRFAM: 40-residue YVTN family beta-propeller repeat.
   
   0.781
AGA29107.1
YVTN family beta-propeller repeat protein; PFAM: Di-haem cytochrome c peroxidase; TIGRFAM: 40-residue YVTN family beta-propeller repeat.
   
   0.781
AGA31468.1
YVTN family beta-propeller repeat protein; PFAM: Cytochrome c; Di-haem cytochrome c peroxidase; TIGRFAM: 40-residue YVTN family beta-propeller repeat.
   
   0.781
AGA26424.1
Hypothetical protein.
       0.773
AGA31269.1
PFAM: Protein of unknown function (DUF3386).
  
     0.771
AGA26426.1
Hypothetical protein.
 
     0.766
AGA31511.1
PFAM: Phosphate-selective porin O and P.
  
     0.765
AGA31277.1
Hypothetical protein.
  
     0.764
AGA25725.1
Hypothetical protein.
  
     0.754
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.