STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA26542.1Hypothetical protein. (1116 aa)    
Predicted Functional Partners:
AGA31309.1
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: Predicted membrane protein (DUF2079).
  
     0.626
AGA26795.1
PFAM: O-Antigen ligase.
  
     0.579
AGA27098.1
Hypothetical protein.
  
     0.571
AGA27991.1
PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
  
     0.568
AGA24600.1
Hypothetical protein.
  
     0.566
AGA31111.1
Transposase family protein; PFAM: Transposase Tn5 dimerisation domain; Transposase DDE domain.
  
     0.564
AGA24976.1
Transposase family protein; PFAM: Transposase Tn5 dimerisation domain; Transposase DDE domain.
  
     0.563
AGA28591.1
Transposase family protein; PFAM: Transposase Tn5 dimerisation domain; Transposase DDE domain.
  
     0.563
AGA31388.1
Transposase family protein; PFAM: Transposase Tn5 dimerisation domain; Transposase DDE domain.
  
     0.563
AGA24996.1
Transposase family protein; PFAM: Transposase Tn5 dimerisation domain; Transposase DDE domain.
  
     0.562
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.