STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA26558.1PFAM: Predicted permease YjgP/YjgQ family. (388 aa)    
Predicted Functional Partners:
AGA26245.1
ABC-type (unclassified) transport system, ATPase component; PFAM: ABC transporter.
   
 0.979
AGA26559.1
PFAM: Predicted permease YjgP/YjgQ family.
 
  
  0.949
AGA29272.1
Type II secretory pathway, component PulD; PFAM: Bacterial type II and III secretion system protein; Belongs to the bacterial secretin family.
  
    0.723
AGA30331.1
Hypothetical protein.
  
     0.698
AGA29390.1
Hypothetical protein.
 
     0.669
AGA25988.1
Hypothetical protein.
  
     0.617
AGA26487.1
Hypothetical protein.
  
     0.609
AGA28837.1
Putative phosphoesterase or phosphohydrolase.
  
     0.591
AGA29091.1
PEGA domain-containing protein; PFAM: PEGA domain.
  
     0.588
AGA24842.1
N-terminal double-transmembrane domain-containing protein; PFAM: von Willebrand factor type A domain; Aerotolerance regulator N-terminal; TIGRFAM: N-terminal double-transmembrane domain.
  
     0.578
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.