STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA26580.1TIGRFAM: methyltransferase, FkbM family. (470 aa)    
Predicted Functional Partners:
AGA26581.1
Uncharacterized protein involved in propionate catabolism; PFAM: MmgE/PrpD family.
       0.773
AGA31107.1
TIGRFAM: methyltransferase, FkbM family.
  
     0.758
AGA30297.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: O-methyltransferase.
  
  
 0.729
AGA26583.1
TIGRFAM: methyltransferase, FkbM family.
 
  
0.613
AGA26582.1
Sulfotransferase family protein; PFAM: Sulfotransferase domain.
       0.524
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
  
 0.490
rsmG
16S rRNA (guanine(527)-N(7))-methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.471
AGA26579.1
Putative membrane protein involved in D-alanine export; PFAM: MBOAT family; Belongs to the membrane-bound acyltransferase family.
       0.469
AGA24476.1
PFAM: Eukaryotic-type carbonic anhydrase.
   
    0.465
AGA26576.1
Hypothetical protein.
       0.442
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.