STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA26621.1Site-specific recombinase, DNA invertase Pin; PFAM: Recombinase; Resolvase, N terminal domain. (734 aa)    
Predicted Functional Partners:
AGA30769.1
Hypothetical protein.
  
     0.675
AGA26309.1
Site-specific recombinase XerD; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
  
    0.625
AGA31471.1
Hypothetical protein.
  
     0.546
AGA26013.1
Site-specific recombinase XerD; PFAM: Phage integrase family.
  
    0.543
AGA25988.1
Hypothetical protein.
  
     0.537
AGA29390.1
Hypothetical protein.
  
     0.492
AGA29272.1
Type II secretory pathway, component PulD; PFAM: Bacterial type II and III secretion system protein; Belongs to the bacterial secretin family.
  
     0.491
AGA30331.1
Hypothetical protein.
  
     0.488
AGA28232.1
Nucleoside phosphorylase.
  
     0.484
AGA31155.1
Antirepressor regulating drug resistance protein; PFAM: BlaR1 peptidase M56.
  
     0.481
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.