STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA26740.1PFAM: Aldo/keto reductase family. (326 aa)    
Predicted Functional Partners:
AGA25904.1
PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase, Arthrobacter type.
     
 0.905
xylA
PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase; Belongs to the xylose isomerase family.
     
 0.905
AGA26741.1
PFAM: Taurine catabolism dioxygenase TauD, TfdA family.
 
    0.786
AGA26944.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 0.688
AGA28873.1
PFAM: PrkA AAA domain; PrkA serine protein kinase C-terminal domain.
   
    0.655
AGA30711.1
Sulfite reductase, alpha subunit (flavoprotein); PFAM: Flavodoxin; FAD binding domain; Oxidoreductase NAD-binding domain; Cytochrome P450.
   
 0.648
AGA30485.1
Cobalamin-dependent methionine synthase I; PFAM: Homocysteine S-methyltransferase.
   
 0.624
AGA26414.1
Polyketide synthase family protein; PFAM: Phosphopantetheine attachment site; Acyl transferase domain; KR domain; Alcohol dehydrogenase GroES-like domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; Zinc-binding dehydrogenase.
  
  
 0.595
AGA29882.1
PFAM: Putative Fe-S cluster; FAD binding domain; Oxidoreductase NAD-binding domain.
     
 0.572
AGA24623.1
PFAM: Copper/zinc superoxide dismutase (SODC).
   
 
 0.537
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.