STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA26767.1PFAM: NAD dependent epimerase/dehydratase family. (329 aa)    
Predicted Functional Partners:
AGA24664.1
Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase.
 
 0.941
AGA26766.1
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
    0.922
AGA27152.1
UDP-glucose pyrophosphorylase; PFAM: Nucleotidyl transferase.
 
  
 0.917
AGA26764.1
PFAM: Glycosyl transferase family 2.
 
    0.908
AGA30640.1
PFAM: Galactose-1-phosphate uridyl transferase, C-terminal domain; Galactose-1-phosphate uridyl transferase, N-terminal domain; TIGRFAM: galactose-1-phosphate uridylyltransferase, family 1.
   
 
 0.902
AGA26770.1
Putative dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold.
 
    0.873
AGA26768.1
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
    0.864
AGA26769.1
Hypothetical protein; PFAM: Bacterial transferase hexapeptide (three repeats).
 
    0.862
AGA26765.1
PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
 
     0.828
AGA26771.1
ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter.
  
  
 0.752
Your Current Organism:
Singulisphaera acidiphila
NCBI taxonomy Id: 886293
Other names: S. acidiphila DSM 18658, Singulisphaera acidiphila DSM 18658, Singulisphaera acidiphila MOB10, Singulisphaera acidiphila str. DSM 18658, Singulisphaera acidiphila strain DSM 18658
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.